New Phytol|中科院土壤所李光杰团队揭示WRKY46通过负调控NUDX9和IAA结合基因抑制NH4+外流。

铵(NH4+)对大多数已经处于中等水平的植物的根系生长是有毒的。转录调控是植物对NH4+毒害反应的重要机制之一,但转录因子(TFs)参与这种调控的性质尚不清楚。

在这里,对拟南芥根进行RNA-seq分析以筛选对铵离子敏感的TFs。选择对NH4+最敏感的WRKY转录因子家族成员WRKY46。我们通过突变和过表达分析确定了WRKY46的作用,并通过酵母单杂交、电泳迁移率转移分析和芯片定量PCR鉴定了WRKY46对NUDX9和IAA结合基因的调控。

WRKY46基因敲除增加,而WRKY46过表达减少,NH4+抑制初生根。WRKY46直接与NUDX9和IAA结合基因(GH3.1,GH3.6,UGT75D1,UGT84B2)的启动子结合并抑制其转录,从而积极调节游离IAA含量并稳定蛋白质N-糖基化,导致抑制根伸长区(EZ)中NH4+的外流。

我们鉴定了TF参与调节EZ的NH4+外流,并表明WRKY46通过负调控NUDX9和IAA结合基因抑制NH4+外流。

Ammonium (NH4+) is toxic to root growth in most plants already at moderate levels. Transcriptional regulation is one of the most important mechanisms in plant’s response to NH4+ toxicity, but the nature of the involvement of transcription factors (TFs) in this regulation remains unclear.

Here, RNA-seq analysis in Arabidopsis roots was performed to screen ammonium-responsive TFs. WRKY46, the member of the WRKY transcription factor family most responsive to NH4+, was selected. We define the role of WRKY46 by using mutation and overexpression assays, and characterize the regulation of NUDX9 and IAA-conjugating genes by WRKY46 via yeast one-hybrid and electrophoretic mobility shift assays and ChIP-quantitative PCR.

Knockout of WRKY46 increased, while overexpression of WRKY46 decreased, NH4+-suppression of the primary root. WRKY46 is shown to directly bind to the promoters of the NUDX9 and IAA-conjugating genes (GH3.1, GH3.6, UGT75D1, UGT84B2) and inhibits their transcription, thus positively regulating free IAA content and stabilizing protein N-glycosylation, leading to an inhibition of NH4+ efflux in the root elongation zone (EZ).

We identify TF involvement in regulating NH4+ efflux in the EZ, and show that WRKY46 inhibits NH4+ efflux by negative regulation of NUDX9 and IAA-conjugating genes.

https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.17554?af=R

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