NGSchool的2016 Workshops -也非常全面的ppt

这是国外一个很有趣的生物信息学培训组织:

这么多课程居然只要50欧元!!!

Registration will be opened between 1 May and 1 July 2016 (12:00 CET). The registration fee is €50. This will cover all expenses (materials, accommodation, meals and travel grant), thanks to generous support from International Visegrad Fund.

2016年是他们举办的第一期哦,所有课件均可下载的。

直接上目录吧:

Preparation for the NGSchool

Day 0: Welcome and get together session

Day 1: Introduction to Linux & Bioinformatics

Day 2: De novo genome assembly & annotation

Day 3: CNV detection & differential expression

Day 4: Bisulphite sequencing, ChIP-seq & Hi-C

Bisulphite sequencing

ChIP-Seq data analysis

Day 5: Molecular data integration

Day 6: NGS & Biomedicine

Day 7: Recap & Farewell

GUIDELINES FOR SPEAKERS

当然,2017年的第二期马上就要开始咯,可以自己去了解如何参加哈。

What is #NGSchool?

#NGSchool (Next Generation School or Next Generation Sequencing School) is a project / platform to share the expertise in the field of High Throughput Sequencing Data Analysis and general Bioinformatics. Summer School in Bioinformatics & NGS Data Analysis, our flagship annual event, connects experts and students / early stage researchers from these fields, in order to exchange their expertise and learn one from other.

The very first Summer School in Bioinformatics & NGS Data Analysis (#NGSchool2016) was held on August 14-21, 2016 in Dolný Smokovec, Slovakia. We are currently organising the second event, #NGSchool2017, that will be held on Sep 10-17 2017 in Jachranka k/Warszawy. Registration is now opened (http://bit.ly/ngschoool2017_registration). Please register till 30 June.

Areas of interest

We select topics of interest for each event. Below you can find rather inclusive lists of our interests:

  • working with Linux and command-line

  • general NGS data handling

    • data formats (FastQ, SAM, BAM, VCF)

    • Quality Control

  • de novo genome & transcriptome assembly

    • dealing with heterozygous/polyploid genomes

  • gene prediction and functional annotation

  • detection of SNPs & SVs (deletions, duplications, inversions, translocations)

    • prediction of functional effects of detected variants

  • RNA-Seq & differential expression analyses

    • single-cell RNA-Seq

  • bisulphite sequencing, ChIP-Seq & Hi-C data analysis

  • GWAS & integration of molecular data

  • applications of NGS in biomedicine & industry

    • personalised medicine

    • prenatal testing

    • forensic genomics

  • statistics and machine learning

  • programming

    • algorithms in Bioinformatics

Workshop materials

You can find materials from previous editions here.

Social activities

We put a lot of effort to make #NGSchool not only useful, but also very social. Every year, we organise set of social events, including BBQ nights, movie & music nights, hiking in High Tatras and sightseeing (ie. Łomnica, Strbske Pleso, Poprad). So, beside hard working, we try to have lots of fun. Definitely check our photos from last editions!

Can I join this project?

Everyone is welcome! People having no prior experience with Bioinformatics are welcome, but strong motivation is desired! Sign-in for our mailing list if you are interested in next edition of #NGSchool.

If you wish to contribute as speaker / partner / sponsor, join this group or contact us directly.

How much does it cost?

Real cost of #NGSchool oscilates around €500-€600 per participant. We try to keep the registration fee as low as possible in order to accommodate participants from less developed countries and/or poorer regions. Every year, we do our bests to find external funding.

  • In 2016 we've received generous support for #NGSchool2016 from International Visegrad Fund, reducing registration fee to €50 and providing full boarding and travel grants (up to €100) to all participants.

  • This year, we have received the grant from International Visegrad Fund again, so the registration for #NGSchool2017 covering accommodation and full boarding will be free of charge.

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